STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA87932.1PFAM: Acyltransferase family. (412 aa)    
Predicted Functional Partners:
AGA87853.1
Hypothetical protein.
  
    0.653
AGA87383.1
Putative deacetylase; PFAM: Uncharacterized protein conserved in bacteria (DUF2334).
  
    0.616
AGA87930.1
Beta-lactamase class A.
 
     0.578
AGA87931.1
PFAM: Beta-lactamase.
 
     0.575
AGA87382.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
   
 0.572
AGA85701.1
Hypothetical protein.
  
     0.558
AGA87674.1
Hypothetical protein.
  
     0.525
AGA87384.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.509
AGA85794.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2131).
  
     0.474
AGA88535.1
PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4.
 
     0.465
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.