Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA87972.1PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit. (263 aa)    
Predicted Functional Partners:
AGA87973.1
Respiratory nitrate reductase chaperone NarJ; PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone.
 
  
 0.999
AGA87974.1
TIGRFAM: nitrate reductase, beta subunit.
 
 0.999
AGA87975.1
PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.999
AGA87978.1
TIGRFAM: nitrite extrusion protein (nitrite facilitator).
 
 
 0.997
AGA86476.1
PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator).
 
 
 0.987
AGA87976.1
Nitrate/nitrite transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator).
 
 
 0.986
AGA87971.1
Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain.
 
    0.982
AGA86472.1
PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit.
  
 
 0.946
AGA86929.1
TIGRFAM: nitrite reductase [NAD(P)H], small subunit.
  
 
 0.946
moaA-2
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
  
 0.942
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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