Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA88057.1Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family. (181 aa)    
Predicted Functional Partners:
AGA88056.1
PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.992
AGA88055.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.985
AGA88059.1
PFAM: Protein of unknown function (DUF3450).
 
    0.966
AGA88054.1
Hypothetical protein.
 
     0.959
AGA86223.1
PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.912
AGA88058.1
Biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel family.
 
    
0.899
AGA86935.1
Periplasmic protein TonB, links inner and outer membranes; PFAM: Gram-negative bacterial tonB protein.
 
 
 0.882
AGA84906.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
  
 
 0.796
tolR
Cell division and transport-associated protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.743
tolR-2
Cell division and transport-associated protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.731
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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