STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA88228.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
AGA88229.1
PFAM: Acetyltransferase (GNAT) family.
       0.710
argH
PFAM: Lyase; TIGRFAM: argininosuccinate lyase.
       0.698
AGA88230.1
Uncharacterized protein involved in response to NO; PFAM: NnrS protein.
       0.583
AGA88225.1
Response regulator of the LytR/AlgR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
       0.444
AGA88226.1
Putative signal transduction protein with a C-terminal ATPase domain; PFAM: Histidine kinase.
       0.444
AGA88231.1
Hypothetical protein.
       0.416
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.