STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA88230.1Uncharacterized protein involved in response to NO; PFAM: NnrS protein. (382 aa)    
Predicted Functional Partners:
AGA85737.1
Hypothetical protein.
  
    0.761
AGA88229.1
PFAM: Acetyltransferase (GNAT) family.
       0.636
AGA88228.1
Hypothetical protein.
       0.583
AGA85390.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
     0.576
AGA85738.1
Hemoglobin-like flavoprotein; PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; Globin; Belongs to the globin family.
  
  
 0.575
AGA85385.1
Regulator of nitric oxide reductase transcription; PFAM: FMN-binding domain.
 
    0.574
nosZ
Nitrous oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
   
 0.567
AGA85389.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.558
AGA85387.1
Parallel beta-helix repeat (two copies); PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies).
 
  
 0.555
AGA85419.1
PFAM: Cytochrome c.
 
    0.545
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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