Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA88357.1Opacity protein. (201 aa)    
Predicted Functional Partners:
AGA88358.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
  
 0.823
AGA88359.1
PFAM: PhoQ Sensor; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
  
  
 0.814
AGA87338.1
PFAM: Outer membrane protein (OmpH-like).
    
 
 0.750
AGA87356.1
Outer membrane lipoprotein.
   
  
 0.655
AGA88022.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
  
  
 0.607
AGA86836.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OprF membrane domain; OmpA family.
  
 
 0.595
AGA88023.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 0.587
AGA85843.1
PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor.
      
 0.549
AGA86170.1
PFAM: Phosphate-selective porin O and P.
      
 0.494
AGA88356.1
Hypothetical protein.
       0.488
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.