Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGA88360.1PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related. (147 aa)    
Predicted Functional Partners:
AGA85662.1
Hypothetical protein.
  
     0.573
AGA88358.1
PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
       0.559
AGA88359.1
PFAM: PhoQ Sensor; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
       0.559
AGA86879.1
PFAM: Fatty acid desaturase.
  
     0.502
AGA85663.1
Hypothetical protein.
  
     0.500
AGA88244.1
Hypothetical protein.
  
     0.424
AGA88357.1
Opacity protein.
       0.424
AGA87438.1
Hypothetical protein.
  
     0.417
AGA85974.1
Lactoylglutathione lyase-like lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
     0.401
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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