Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA88397.1Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold. (534 aa)    
Predicted Functional Partners:
AGA88396.1
Response regulator of citrate/malate metabolism; PFAM: Response regulator receiver domain.
 
 0.998
AGA88398.1
Na+/citrate symporter; PFAM: 2-hydroxycarboxylate transporter family; TIGRFAM: citrate carrier protein, CCS family.
 
  
 0.845
AGA84817.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter family receptor.
 
    0.499
AGA84983.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter family receptor.
 
    0.487
AGA84819.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter TctA family.
 
     0.480
AGA84981.1
Hypothetical protein; PFAM: Tripartite tricarboxylate transporter TctA family.
 
     0.474
AGA88769.1
PAS domain S-box; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain; PAS fold; TIGRFAM: PAS domain S-box.
  
  
 0.402
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.