Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
AGA88552.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
AGA88553.1
Putative permease; PFAM: Domain of unknown function (DUF897).
 
 
 
 0.976
AGA88246.1
PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; TC 1.A.11.
 
 
 0.920
AGA87295.1
Ammonia permease; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter.
  
 
 0.907
AGA88247.1
PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11.
  
 
 0.907
AGA88405.1
Signal transduction histidine kinase, nitrogen specific; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold.
  
 
 0.795
argA
N-acetylglutamate synthase; PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase.
   
 
 0.784
argB
N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.773
AGA88188.1
PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
  
  
 0.765
glsA
L-glutaminase; PFAM: Glutaminase; TIGRFAM: glutaminase A; Belongs to the glutaminase family.
 
   
 0.683
AGA88554.1
Oxaloacetate decarboxylase alpha subunit; PFAM: HMGL-like; Conserved carboxylase domain; Biotin-requiring enzyme; TIGRFAM: oxaloacetate decarboxylase alpha subunit.
     
 0.675
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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