STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA88572.1PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily. (142 aa)    
Predicted Functional Partners:
AGA86046.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
  
  
 0.780
AGA88571.1
Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold.
  
  
 0.697
AGA88782.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.665
AGA88343.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1508).
   
    0.657
AGA88573.1
DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
       0.545
AGA87381.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.531
AGA88457.1
PFAM: Aldo/keto reductase family.
  
    0.525
AGA88764.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
   
  
 0.503
AGA88150.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
   
    0.500
AGA86285.1
Cu/Zn superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
  
 0.497
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.