STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA88655.1Hypothetical protein. (473 aa)    
Predicted Functional Partners:
AGA88656.1
Methylase of polypeptide chain release factors; PFAM: Methyltransferase small domain; Belongs to the methyltransferase superfamily.
 
    0.949
AGA86705.1
Maltooligosyl trehalose hydrolase; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase.
   
  
 0.842
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.840
AGA86691.1
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase-fused probable maltokinase; trehalose synthase.
   
    0.807
AGA87602.1
Putative outer membrane protein.
  
  
 0.773
AGA88431.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
    0.764
AGA87739.1
Putative membrane protein; PFAM: MgtC family.
   
    0.745
AGA86682.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
  
  
 0.731
AGA85618.1
Hypothetical protein.
  
     0.705
AGA85620.1
Hypothetical protein.
  
     0.703
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.