STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA88727.1ABC-type uncharacterized transport system, auxiliary component; PFAM: Protein of unknown function (DUF330). (207 aa)    
Predicted Functional Partners:
AGA88726.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
 
   0.994
AGA88725.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
    0.965
AGA88724.1
PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; manually curated.
 
  
 0.950
AGA87796.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
  
   0.685
AGA88728.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
       0.548
AGA88730.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
       0.548
AGA88729.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; ABC-2 type transporter.
       0.528
AGA88723.1
PFAM: Catalase.
       0.480
AGA88683.1
Hypothetical protein.
  
     0.469
AGA87798.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
  
    0.465
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.