STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA88761.1PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (134 aa)    
Predicted Functional Partners:
AGA86002.1
Hypothetical protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
  
 0.752
aguA
Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine.
       0.631
AGA86666.1
Outer membrane protein; PFAM: Surface antigen variable number repeat; Surface antigen.
   
    0.500
AGA88759.1
N-carbamoylputrescine amidase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase.
       0.487
AGA85728.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
  
 0.427
AGA85911.1
Hypothetical protein; PFAM: YCII-related domain.
 
     0.425
AGA86417.1
Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Surface antigen variable number repeat; Patatin-like phospholipase; Surface antigen.
   
    0.416
AGA84952.1
PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family.
  
    0.401
AGA87991.1
PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; uncharacterized flavoprotein, PP_4765 family.
  
    0.401
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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