Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA88804.1PFAM: SCO1/SenC. (211 aa)    
Predicted Functional Partners:
AGA88802.1
PFAM: Cytochrome oxidase assembly protein.
 
 0.963
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.919
AGA88800.1
Hypothetical protein; PFAM: SURF1 family.
 
 
 0.908
AGA88797.1
PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11.
 
 0.834
AGA86761.1
PFAM: Protein of unknown function (DUF461).
 
   
 0.808
AGA86038.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
 
 
 0.784
AGA88795.1
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.779
AGA86154.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin.
 
 
 0.760
AGA87037.1
PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c; TIGRFAM: cytochrome c oxidase, subunit II.
 
 0.706
AGA86823.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; PFAM: Multicopper oxidase; Copper binding proteins, plastocyanin/azurin family; TIGRFAM: nitrite reductase, copper-containing.
  
 0.699
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
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