STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA88813.1Hypothetical protein. (135 aa)    
Predicted Functional Partners:
AGA85080.1
Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase.
  
     0.722
AGA85624.1
Hypothetical protein.
  
     0.715
AGA85690.1
PFAM: YebG protein.
  
     0.706
AGA88812.1
PFAM: Protein of unknown function (DUF3301).
 
     0.696
AGA86987.1
Hypothetical protein.
  
     0.694
AGA87490.1
Hypothetical protein.
  
     0.681
AGA86372.1
Hypothetical protein.
  
     0.646
AGA85237.1
PFAM: Uncharacterised protein family (UPF0259).
  
     0.617
AGA87731.1
Hypothetical protein.
  
     0.616
AGA88020.1
PFAM: Peptidase propeptide and YPEB domain.
  
     0.610
Your Current Organism:
Pseudomonas stutzeri
NCBI taxonomy Id: 644801
Other names: P. stutzeri RCH2, Pseudomonas stutzeri RCH2, Pseudomonas stutzeri str. RCH2, Pseudomonas stutzeri strain RCH2
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.