STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0047KEGG: pla:Plav_2310 hypothetical protein; SPTR: Putative uncharacterized protein. (105 aa)    
Predicted Functional Partners:
Tmar_0048
InterPro IPR010090; KEGG: nca:Noca_0550 TP901 family phage tail tape measure protein; PFAM: tail tape measure protein TP901 core region; SPTR: Phage tail tape measure protein, TP901 family; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: Phage-related minor tail protein; TIGRFAM: phage tail tape measure protein, TP901 family, core region.
       0.773
Tmar_0049
Phage tail component; COGs: COG4722 Phage-related protein; InterPro IPR008841: IPR006520; KEGG: bcg:BCG9842_B1390 phage tail fiber protein; PFAM: tail component family protein; SPTR: Phage-related protein; TIGRFAM: phage tail component; PFAM: Phage tail protein; TIGRFAM: putative phage tail component, N-terminal domain.
       0.773
Tmar_0050
Phage minor structural protein; InterPro IPR007119; KEGG: pth:PTH_2176 hypothetical protein; SPTR: Phage-related protein; TIGRFAM: phage minor structural protein; PFAM: Protein of unknown function (DUF1142); TIGRFAM: phage minor structural protein, N-terminal region.
       0.773
Tmar_0051
KEGG: bbe:BBR47_06400 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.741
Tmar_0044
KEGG: azc:AZC_1117 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.737
Tmar_0045
KEGG: pth:PTH_2181 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage major tail protein 2.
       0.737
Tmar_0046
KEGG: pth:PTH_2180 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3356).
       0.737
Tmar_0052
KEGG: bbe:BBR47_06380 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.716
Tmar_0040
Hypothetical protein; InterPro IPR011738; KEGG: pla:Plav_0908 phiE125 gp8 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage conserved hypothetical protein, phiE125 gp8 family.
       0.702
Tmar_0041
KEGG: mbr:MONBRDRAFT_26870 hypothetical protein; SPTR: Predicted protein.
       0.702
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.