STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0176COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR020013: IPR012836; KEGG: mta:Moth_0797 hypothetical protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins. (249 aa)    
Predicted Functional Partners:
Tmar_0177
COGs: COG4786 Flagellar basal body rod protein; InterPro IPR001444: IPR010930: IPR020013: IPR019776; KEGG: nth:Nther_2833 flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: Flagellar basal-body rod protein FlgG; TIGRFAM: fagellar hook-basal body protein; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins.
 
 
0.995
Tmar_0976
COGs: COG1558 Flagellar basal body rod protein; InterPro IPR006299: IPR019776: IPR001444: IPR010930; KEGG: mta:Moth_0769 flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; SPTR: Flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.995
Tmar_0984
COGs: COG1843 Flagellar hook capping protein; InterPro IPR005648; KEGG: nth:Nther_1398 flagellar hook capping protein; PFAM: flagellar hook capping protein; SPTR: Flagellar hook capping protein; PFAM: Flagellar hook capping protein.
 
 
 0.979
Tmar_0978
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.976
Tmar_0975
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.975
Tmar_0979
COGs: COG1536 Flagellar motor switch protein; InterPro IPR000090: IPR006668; KEGG: hmo:HM1_2222 flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; MgtE intracellular region; SPTR: Flagellar motor switch protein flig; TIGRFAM: flagellar motor switch protein FliG; PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG.
 
 
 0.970
Tmar_0988
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689: IPR001543; KEGG: ate:Athe_2161 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
 
 
 0.967
flgK
COGs: COG1256 Flagellar hook-associated protein; InterPro IPR001444: IPR010930: IPR002371: IPR017975; KEGG: tjr:TherJR_2798 flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; SPTR: Flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK.
 
  
 0.962
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.960
Tmar_0989
COGs: COG1886 Flagellar motor switch/type III secretory pathway protein; InterPro IPR012826: IPR001543: IPR001172; KEGG: tjr:TherJR_1529 CheC, inhibitor of MCP methylation / FliN fusion protein; PFAM: surface presentation of antigens (SPOA) protein; SPTR: CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN.
 
 
 0.958
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.