STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0230Hypothetical protein; KEGG: rpa:RPA2917 phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase. (92 aa)    
Predicted Functional Partners:
Tmar_0228
Death-on-curing family protein; COGs: COG3654 Prophage maintenance system killer protein; InterPro IPR003812: IPR006440; KEGG: hna:Hneap_1982 death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: Death-on-curing family protein; TIGRFAM: death-on-curing family protein; PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein.
       0.465
Tmar_0229
SpoVT/AbrB domain-containing protein; InterPro IPR007159; KEGG: geo:Geob_2522 transcriptional regulator/antitoxin, MazE; PFAM: SpoVT/AbrB domain-containing protein; SPTR: Transcriptional regulator/antitoxin, MazE; PFAM: SpoVT / AbrB like domain.
       0.465
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.