STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0410SCP-like extracellular; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: pth:PTH_1322 hypothetical protein; PFAM: SCP-like extracellular; SPTR: Uncharacterized protein; PFAM: Cysteine-rich secretory protein family. (303 aa)    
Predicted Functional Partners:
Tmar_2363
Sporulation protein YyaC; InterPro IPR009665; KEGG: bts:Btus_3309 sporulation protein YyaC; PFAM: protein of unknown function DUF1256; SPTR: Sporulation protein YyaC; TIGRFAM: sporulation protein YyaC; PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC.
  
   
 0.485
Tmar_2173
Sporulation protein YqfD; InterPro IPR010690; KEGG: mta:Moth_0592 putative stage IV sporulation YqfD; PFAM: stage IV sporulation YqfD; SPTR: Putative stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD.
  
     0.471
Tmar_1815
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871: IPR001851; KEGG: mdi:METDI5909 putative ABC transporter, putative membrane protein precursor with two ATP-binding domains; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; SPTR: Putative ABC transporter, putative membrane protein with two ATP-binding domains; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Branched-chain amino acid transport system / permease component.
   
   0.457
Tmar_0843
Sporulation protein YunB; InterPro IPR019061: IPR014197; KEGG: tjr:TherJR_2119 sporulation protein YunB; PFAM: Sporulation protein YunB-like; SPTR: Sporulation protein YunB; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB (Spo_YunB); TIGRFAM: sporulation protein YunB.
  
     0.455
Tmar_0521
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: rxy:Rxyl_0361 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
    
   0.439
Tmar_0575
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: sfu:Sfum_0836 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
    
   0.439
Tmar_0652
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: lsp:Bsph_4668 high-affinity branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
    
   0.439
Tmar_1789
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tro:trd_1399 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.
    
   0.439
Tmar_2360
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: swo:Swol_2554 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.
    
   0.439
Tmar_1178
KEGG: adg:Adeg_1680 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AG.
  
   
 0.431
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.