STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0506MOSC domain containing protein; InterPro IPR005302; KEGG: bld:BLi03268 YuaD; PFAM: MOSC domain containing protein; SPTR: Putative uncharacterized protein yuaD; PFAM: MOSC domain. (187 aa)    
Predicted Functional Partners:
Tmar_0036
COGs: COG5323 conserved hypothetical protein; KEGG: xau:Xaut_3704 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain.
  
     0.621
Tmar_0622
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
     
 0.480
Tmar_2085
COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR010034: IPR010038: IPR003749: IPR003448; KEGG: sth:STH3180 molybdopterin converting factor-like protein; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; SPTR: Molybdopterin converting factor; TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: ThiS family; MoaE protein; TIGRFAM: MoaD family protein, archaeal; molybdopterin converting factor, subunit 1, non-archaeal.
     
 0.458
Tmar_0037
Phage portal protein, HK97 family; COGs: COG4695 Phage-related protein; InterPro IPR006944: IPR006528: IPR006427; KEGG: pla:Plav_0903 HK97 family phage portal protein; PFAM: portal protein; head morphogenesis protein SPP1 gp7; SPTR: Phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage portal protein; Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family; phage portal protein, HK97 family; phage portal protein, PBSX family.
  
     0.432
Tmar_0038
Phage prohead protease, HK97 family; InterPro IPR006433; KEGG: sro:Sros_3378 hypothetical protein; PFAM: peptidase U35 phage prohead HK97; SPTR: Mu-like prophage I protein-like protein; TIGRFAM: phage prohead protease, HK97 family; PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family.
  
     0.420
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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