STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
murJIntegral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (533 aa)    
Predicted Functional Partners:
Tmar_0645
O-antigen polymerase; InterPro IPR007016; KEGG: gtn:GTNG_3092 ExoQ family exopolysaccharide biosynthesis membrane protein; PFAM: O-antigen polymerase; SPTR: Membrane protein of ExoQ family (Involved in exopolysaccharide production); PFAM: O-Antigen ligase.
     
 0.578
Tmar_0646
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bbe:BBR47_16540 hypothetical protein; PFAM: glycosyl transferase group 1; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferases group 1.
       0.558
Tmar_0648
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_3491 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
       0.507
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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