STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0648COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_3491 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1. (382 aa)    
Predicted Functional Partners:
Tmar_0643
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gtn:GTNG_3097 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Predicted glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
     0.722
Tmar_0674
COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: eel:EUBELI_00097 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Nucleotidyl transferase; PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
 
  
 0.549
Tmar_0717
Nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: ttr:Tter_0698 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose deh [...]
 
  
 0.546
Tmar_0701
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rmr:Rmar_0825 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.523
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
       0.507
Tmar_1102
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: gob:Gobs_1562 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.501
Tmar_0704
COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR001296: IPR003362; KEGG: chy:CHY_1059 sugar transferase family protein; PFAM: sugar transferase; glycosyl transferase group 1; SPTR: Bacterial sugar transferase family protein; PFAM: Bacterial sugar transferase; Glycosyl transferases group 1; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.480
Tmar_0645
O-antigen polymerase; InterPro IPR007016; KEGG: gtn:GTNG_3092 ExoQ family exopolysaccharide biosynthesis membrane protein; PFAM: O-antigen polymerase; SPTR: Membrane protein of ExoQ family (Involved in exopolysaccharide production); PFAM: O-Antigen ligase.
  
  
 0.457
Tmar_0493
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: gka:GK2679 dolichyl-phosphate mannose synthase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
 
 
 0.442
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.