STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0716KEGG: net:Neut_1816 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Plasmid stabilisation system protein. (96 aa)    
Predicted Functional Partners:
Tmar_0714
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.926
Tmar_0715
KEGG: par:Psyc_1114 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3423).
       0.773
Tmar_0713
COGs: COG1569 nucleic acid-binding protein contains PIN domain; InterPro IPR002850: IPR006596; KEGG: mta:Moth_2333 hypothetical protein; SMART: Nucleotide binding protein PINc; SPTR: Putative uncharacterized protein; TIGRFAM: probable toxin-antitoxin system toxin component, PIN family.
 
     0.554
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.