STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0812KEGG: mrd:Mrad2831_3727 translation initiation factor IF-2; SPTR: Translation initiation factor IF-2. (173 aa)    
Predicted Functional Partners:
Tmar_0421
KEGG: pjd:Pjdr2_0515 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.547
Tmar_0417
KEGG: dae:Dtox_2930 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.525
Tmar_0418
KEGG: tjr:TherJR_1104 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.502
Tmar_0416
KEGG: aac:Aaci_1480 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.498
Tmar_0419
KEGG: nth:Nther_0326 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.496
Tmar_0813
COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075: IPR013838; KEGG: sat:SYN_02452 NifU-like domain-containing protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: NifU-like domain protein; PFAM: NifU-like domain.
       0.495
Tmar_1681
KEGG: aac:Aaci_2367 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3243).
  
    0.447
Tmar_2174
KEGG: bbe:BBR47_20600 hypothetical protein; SPTR: Putative uncharacterized protein yqfC; PFAM: YabP family; TIGRFAM: sporulation protein YqfC.
  
     0.441
Tmar_0936
Sporulation integral membrane protein YlbJ; COGs: COG3314 conserved hypothetical protein; InterPro IPR014226: IPR011642; KEGG: nth:Nther_1350 sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; SPTR: Sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ.
  
     0.423
Tmar_1386
KEGG: gwc:GWCH70_1183 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3243).
   
    0.422
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.