STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_0936Sporulation integral membrane protein YlbJ; COGs: COG3314 conserved hypothetical protein; InterPro IPR014226: IPR011642; KEGG: nth:Nther_1350 sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; SPTR: Sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ. (402 aa)    
Predicted Functional Partners:
Tmar_2173
Sporulation protein YqfD; InterPro IPR010690; KEGG: mta:Moth_0592 putative stage IV sporulation YqfD; PFAM: stage IV sporulation YqfD; SPTR: Putative stage IV sporulation YqfD; TIGRFAM: sporulation protein YqfD; PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD.
 
   
 0.832
Tmar_2174
KEGG: bbe:BBR47_20600 hypothetical protein; SPTR: Putative uncharacterized protein yqfC; PFAM: YabP family; TIGRFAM: sporulation protein YqfC.
 
   
 0.822
Tmar_0174
Sporulation transcriptional regulator SpoIIID; InterPro IPR014208: IPR018356; KEGG: sth:STH103 stage III sporulation protein D; SPTR: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID; PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID.
  
  
 0.790
Tmar_0873
InterPro IPR005081; KEGG: dau:Daud_1427 peptidase U4, sporulation factor SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA; SPTR: Peptidase U4, sporulation factor SpoIIGA; PFAM: Sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA.
  
   
 0.786
Tmar_1180
Stage III sporulation protein AE; InterPro IPR014194; KEGG: dau:Daud_1011 hypothetical protein; PFAM: Sporulation stage III protein AE; SPTR: Putative uncharacterized protein; TIGRFAM: stage III sporulation protein AE; PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
    0.779
Tmar_0876
InterPro IPR014202; KEGG: bts:Btus_3254 stage II sporulation protein R; PFAM: Sporulation stage II protein R; SPTR: Stage II sporulation protein R; PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R.
  
   
 0.778
Tmar_1181
InterPro IPR014211; KEGG: hor:Hore_06200 sporulation stage III protein AD; SPTR: Sporulation stage III protein AD; TIGRFAM: stage III sporulation protein AD; PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD.
  
     0.773
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.771
Tmar_1147
Protein of unknown function DUF95 transmembrane; InterPro IPR002798; KEGG: dau:Daud_1284 required for dissolution of the septal cell wall; RBL05740; PFAM: protein of unknown function DUF95 transmembrane; SPTR: Required for dissolution of the septal cell wall; RBL05740; PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
   
 0.771
Tmar_1106
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.767
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.