STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1211InterPro IPR018705; KEGG: adg:Adeg_1038 hypothetical protein; PFAM: Protein of unknown function DUF2134, membrane; SPTR: Putative uncharacterized protein. (344 aa)    
Predicted Functional Partners:
Tmar_1210
COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR017592: IPR013974; KEGG: adg:Adeg_1039 Flp pilus assembly protein CpaB; PFAM: SAF domain protein; SPTR: Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.942
Tmar_1206
Type II secretion system F domain; COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: adg:Adeg_1043 type II secretion system F domain protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system F domain protein; PFAM: Bacterial type II secretion system protein F domain.
 
    0.910
Tmar_1207
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: adg:Adeg_1042 type II secretion system F domain protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system F domain protein; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.910
Tmar_1208
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR017975: IPR001482; KEGG: adg:Adeg_1041 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein.
 
  
 0.892
Tmar_1212
TadE family protein; InterPro IPR012495; KEGG: drm:Dred_2112 TadE family protein; PFAM: TadE family protein; SPTR: TadE family protein; PFAM: TadE-like protein.
 
     0.892
Tmar_1204
COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR017592: IPR013974; KEGG: afw:Anae109_3969 SAF domain-containing protein; PFAM: SAF domain protein; SPTR: Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.884
Tmar_1201
COGs: COG4965 Flp pilus assembly protein TadB; KEGG: afw:Anae109_3965 type II secretion system protein; SPTR: Type II secretion system protein.
 
  
 0.874
Tmar_1209
Response regulator receiver protein; COGs: COG0455 ATPase involved in chromosome partitioning; InterPro IPR001789; KEGG: pth:PTH_1450 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain; CobQ/CobB/MinD/ParA nucleotide binding domain.
 
     0.855
Tmar_1202
Type II secretion system protein E; COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR001482; KEGG: tro:trd_1011 CpaF; PFAM: type II secretion system protein E; SPTR: CpaF; PFAM: Type II/IV secretion system protein.
 
  
 0.818
Tmar_0456
Protein of unknown function DUF192; COGs: COG1430 conserved hypothetical protein; InterPro IPR003795; KEGG: gem:GM21_3209 protein of unknown function DUF192; PFAM: protein of unknown function DUF192; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1430.
 
     0.788
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.