STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1295InterPro IPR004995; KEGG: tpd:Teth39_0180 GerA spore germination protein; PFAM: GerA spore germination protein; SPTR: GerA spore germination protein; PFAM: Bacillus/Clostridium GerA spore germination protein. (751 aa)    
Predicted Functional Partners:
Tmar_1297
InterPro IPR008844; KEGG: bts:Btus_0811 germination protein, Ger(X)C family; SPTR: Germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
  
 0.886
Tmar_1296
Spore germination protein; InterPro IPR004761; KEGG: amt:Amet_4598 spore germination protein; PFAM: Spore germination protein; SPTR: Spore germination protein; PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).
 
  
 0.821
Tmar_0067
InterPro IPR008844; KEGG: gwc:GWCH70_2165 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: Germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
  
 0.820
Tmar_1137
InterPro IPR010894; KEGG: pth:PTH_1229 stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD.
  
  
 0.794
Tmar_1138
SpoVA protein; InterPro IPR005562; KEGG: slp:Slip_0528 stage V sporulation protein AC; PFAM: SpoVA protein; SPTR: Stage V sporulation protein AC; PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC.
  
  
 0.790
Tmar_0876
InterPro IPR014202; KEGG: bts:Btus_3254 stage II sporulation protein R; PFAM: Sporulation stage II protein R; SPTR: Stage II sporulation protein R; PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R.
 
    0.787
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.782
Tmar_0069
Spore germination protein; InterPro IPR004761; KEGG: tjr:TherJR_2524 spore germination protein; PFAM: Spore germination protein; SPTR: Spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).
 
  
 0.781
Tmar_1136
SpoVA protein; InterPro IPR005562; KEGG: pth:PTH_1230 hypothetical protein; PFAM: SpoVA protein; SPTR: Hypothetical membrane protein; PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE.
  
  
 0.780
Tmar_0132
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001932: IPR010822; KEGG: sth:STH3200 stage II sporulation protein E; PFAM: Stage II sporulation protein E; PRIAM: Phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: Stage II sporulation protein E; PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E.
  
   
 0.779
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.