STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1326ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR017871: IPR003439: IPR003339: IPR003593; KEGG: aac:Aaci_0945 ABC transporter related; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; Cobalt transport protein. (865 aa)    
Predicted Functional Partners:
Tmar_1327
COGs: COG4721 membrane protein; InterPro IPR017195; KEGG: esi:Exig_1584 YkoE; PFAM: ABC-type thiamin-related transport system, permease component 1, predicted; SPTR: Putative uncharacterized protein ykoE; PFAM: ABC-type cobalt transport system, permease component.
 
  
 0.988
ecfA
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
0.971
Tmar_2265
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
0.970
Tmar_0533
BioY protein; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: rxy:Rxyl_2901 BioY protein; PFAM: BioY protein; SPTR: BioY protein; PFAM: BioY family.
  
 
 0.886
thiG
Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.751
Tmar_1325
Transcriptional activator, TenA family; COGs: COG0819 Putative transcription activator; InterPro IPR004305; KEGG: npu:Npun_R3311 TenA family transcription regulator; PFAM: TENA/THI-4 domain-containing protein; SPTR: TENA/THI-4 family; PFAM: TENA/THI-4/PQQC family.
  
  
 0.692
Tmar_2264
COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: sth:STH3043 cobalt ABC transporter permease protein; PFAM: cobalt transport protein; SPTR: Cobalt ABC transporter permease protein; PFAM: Cobalt transport protein.
 
 
 0.688
Tmar_1704
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439: IPR003593: IPR010066: IPR017871: IPR 013563; KEGG: cwo:Cwoe_2173 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal regio [...]
  
 
0.670
Tmar_1943
Oligopeptide/dipeptide ABC transporter, ATPase subunit; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR010066: IPR003593: IPR003439: IPR017871: IPR 013563; KEGG: smd:Smed_5658 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, [...]
  
 
0.670
Tmar_1103
MoaD family protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR001763: IPR010038: IPR003749: IPR000594: IPR 007901; KEGG: ttr:Tter_1313 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; thiamineS protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Putative Molybdopterin biosynthesis protein moeB (Modular protein); TIGRFAM: MoaD family protein; PFAM: ThiS family; MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; TIGRFAM: MoaD [...]
  
  
 0.628
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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