STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1444InterPro IPR011701; KEGG: rca:Rcas_4328 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily. (544 aa)    
Predicted Functional Partners:
Tmar_1445
Protein of unknown function DUF2089; COGs: COG3877 conserved hypothetical protein; InterPro IPR018658; KEGG: sti:Sthe_2144 hypothetical protein; PFAM: Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function(DUF2089).
 
     0.812
Tmar_1250
InterPro IPR011701; KEGG: ttr:Tter_0763 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Bacterial protein of unknown function (DUF894).
  
     0.773
Tmar_1446
Protein of unknown function DUF2089; InterPro IPR018658; KEGG: ttr:Tter_0875 hypothetical protein; PFAM: Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein.
       0.773
Tmar_1443
Domain of unknown function DUF1731; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR001509: IPR013549: IPR010099; KEGG: rrs:RoseRS_2118 hypothetical protein; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777.
  
    0.473
Tmar_1447
Hypothetical protein; KEGG: dra:DR_B0123 iron ABC transporter, permease protein; SPTR: Iron ABC transporter, permease protein.
       0.445
Tmar_1903
Major facilitator superfamily MFS_1; InterPro IPR018212: IPR011701; KEGG: dsy:DSY1410 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: Major Facilitator Superfamily.
  
     0.426
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.