STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1506Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707: IPR012746: IPR001287; KEGG: chl:Chy400_1706 nitrite reductase, copper-containing; PFAM: multicopper oxidase type 3; PRIAM: Nitrite reductase (NO-forming); SPTR: Nitrite reductase, copper-containing; TIGRFAM: nitrite reductase, copper-containing; PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing. (378 aa)    
Predicted Functional Partners:
Tmar_1508
Hemerythrin HHE cation binding domain protein; COGs: COG4309 conserved hypothetical protein; InterPro IPR012312; KEGG: mgi:Mflv_3486 hemerythrin HHE cation binding domain-containing protein; PFAM: Hemerythrin HHE cation binding domain protein; SPTR: Hemerythrin HHE cation binding domain protein; PFAM: Uncharacterized conserved protein (DUF2249); Hemerythrin HHE cation binding domain.
 
     0.745
Tmar_1288
Hypothetical protein; InterPro IPR002355; KEGG: sth:STH1505 hypothetical protein; SPTR: Conserved domain protein.
 
  
 0.743
Tmar_0449
Blue (type 1) copper domain protein; InterPro IPR000923; KEGG: tro:trd_0373 halocyanin precursor-like protein; PFAM: blue (type 1) copper domain protein; SPTR: Halocyanin-like protein; PFAM: Copper binding proteins, plastocyanin/azurin family.
 
 
 
 0.720
Tmar_1505
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017200: IPR007197: IPR006638; KEGG: hvo:HVO_2144 coenzyme PQQ synthesis protein E homolog; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coenzyme PQQ synthesis protein E homolog; PFAM: Radical SAM superfamily.
 
  
 0.661
Tmar_1651
InterPro IPR000923; KEGG: rpf:Rpic12D_5106 blue (type 1) copper domain protein; PFAM: blue (type 1) copper domain protein; SPTR: Blue (Type 1) copper domain protein.
 
  
 0.632
Tmar_1581
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterPro IPR001757: IPR001877: IPR001756: IPR006121: IPR 006122: IPR006403: IPR006416: IPR018303: IPR017969: IPR008250:I PR005834; KEGG: drm:Dred_2982 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; copper ion binding protein; ATPase, P-type (tra [...]
 
 
 0.587
Tmar_1507
KEGG: rmr:Rmar_2288 copper resistance D; SPTR: Copper resistance D; PFAM: Copper resistance protein D.
 
     0.534
Tmar_1494
Hypothetical protein; InterPro IPR001484; KEGG: oan:Oant_4376 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.527
Tmar_1498
KEGG: gct:GC56T3_2791 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2249).
 
     0.515
merA
Mercuric reductase; Resistance to Hg(2+) in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg(0). Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
 
 
 0.503
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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