STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1558Transcriptional antiterminator, BglG; COGs: COG3711 Transcriptional antiterminator; InterPro IPR013011: IPR011608: IPR005829; KEGG: hor:Hore_20170 transcriptional antiterminator, BglG; PFAM: PRD domain protein; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Transcriptional antiterminator, BglG; PFAM: HTH domain; PTS system, Lactose/Cellobiose specific IIB subunit; PRD domain. (656 aa)    
Predicted Functional Partners:
Tmar_0581
Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: cpo:COPRO5265_0027 PtsN protein; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: PtsN protein; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
 0.978
Tmar_1849
Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: sco:SCO0137 sugar-transport protein; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: Sugar-transporter; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
 0.977
Tmar_1557
COGs: COG3964 amidohydrolase; InterPro IPR006680; KEGG: bbe:BBR47_31700 dihydroorotase; PFAM: amidohydrolase; SPTR: Putative uncharacterized protein; PFAM: Amidohydrolase family.
 
     0.855
Tmar_1555
Hypothetical protein; InterPro IPR020034; KEGG: bbe:BBR47_31680 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Ribose/Galactose Isomerase; TIGRFAM: conserved hypothetical protein EF_0830/AHA_3911.
 
     0.850
Tmar_1556
PRD domain protein; InterPro IPR011608; KEGG: bha:BH3853 transcriptional antiterminator; PFAM: PRD domain protein; SPTR: Transcriptional antiterminator; PFAM: PRD domain; TIGRFAM: PRD domain protein EF_0829/AHA_3910.
       0.773
Tmar_0583
COGs: COG3037 conserved hypothetical protein; KEGG: cpo:COPRO5265_0028 PTS system ascorbate-specific transporter subunit IIC; SPTR: Putative sugar-specific permease, SgaT/UlaA superfamily; PFAM: PTS system sugar-specific permease component.
 
   
 0.767
Tmar_1847
Putative sugar-specific permease SgaT/UlaA; COGs: COG3037 conserved hypothetical protein; InterPro IPR018062; KEGG: smf:Smon_1148 putative sugar-specific permease SgaT/UlaA; SPTR: Transport protein, SgaT family; PFAM: PTS system sugar-specific permease component.
 
   
 0.767
Tmar_1554
KEGG: bcl:ABC1410 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein EF_0831/AHA_3912.
       0.741
Tmar_0582
COGs: COG3414 Phosphotransferase system galactitol-specific IIB component; InterPro IPR013011: IPR003501; KEGG: lin:lin2799 hypothetical protein; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; SPTR: Phosphotransferase system lactose/cellobiose-specific IIB subunit; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
 
  
 0.735
Tmar_1553
Membrane protein; InterPro IPR020042; KEGG: str:Sterm_0957 membrane protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein EF_0832/AHA_3913.
 
     0.699
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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