STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1695Transcriptional antiterminator, BglG; COGs: COG3711 Transcriptional antiterminator; InterPro IPR011608: IPR004341; KEGG: drm:Dred_0333 transcriptional antiterminator, BglG; PFAM: PRD domain protein; CAT RNA-binding domain protein; SPTR: Transcriptional antiterminator, BglG; PFAM: CAT RNA binding domain; PRD domain. (342 aa)    
Predicted Functional Partners:
Tmar_1696
PTS system N-acetylglucosamine-specific IIC component, Glc family; COGs: COG1263 Phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterPro IPR013013: IPR003352; KEGG: tpd:Teth39_1823 PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: phosphotransferase system EIIC; SPTR: PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: Phosphotransferase system, EIIC; TC 4.A.1.1.7; TC 4.A.1.1.7.
 
 
 0.900
Tmar_1698
PTS system, glucose subfamily, IIA subunit; COGs: COG2190 Phosphotransferase system IIA components; InterPro IPR001127; KEGG: sth:STH348 PTS system enzyme IIABC component; PFAM: sugar-specific permease EIIA 1 domain; SPTR: PTS system enzyme IIABC component; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component.
 
 
 
 0.879
Tmar_1699
KEGG: sth:STH347 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.659
Tmar_0618
Protein of unknown function DUF871; COGs: COG3589 conserved hypothetical protein; InterPro IPR008589; KEGG: tex:Teth514_0171 hypothetical protein; PFAM: protein of unknown function DUF871; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF871).
 
    0.612
Tmar_0581
Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: cpo:COPRO5265_0027 PtsN protein; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: PtsN protein; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
  
 0.498
Tmar_1387
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1609 Transcriptional regulators; InterPro IPR005829: IPR001761; KEGG: rxy:Rxyl_2600 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Transcriptional regulator, LacI family; PFAM: family.
   
  
 0.471
Tmar_2036
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 
 
 0.465
Tmar_1694
Hypothetical protein; KEGG: nml:Namu_0037 histidine kinase; SPTR: Histidine kinase.
       0.423
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.