STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1712Uncharacterized conserved protein UCP029876; InterPro IPR008316; KEGG: rsq:Rsph17025_2392 kinase-like protein; PFAM: Uncharacterised conserved protein UCP029876; SPTR: Putative uncharacterized protein. (210 aa)    
Predicted Functional Partners:
Tmar_1711
Nuclease (SNase domain-containing protein); COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021: IPR008613; KEGG: tro:trd_A0730 WD40 domain protein beta propeller; PFAM: nuclease (SNase domain-containing protein); Excalibur domain protein; SMART: nuclease (SNase domain-containing protein); SPTR: WD40 domain protein beta Propeller; PFAM: Staphylococcal nuclease homologue.
       0.504
Tmar_1713
Transcriptional regulator, PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: fal:FRAAL3670 putative transcriptional regulator; PFAM: transcriptional regulator PadR family protein; SPTR: Transcriptional regulator, PadR-like family; PFAM: Transcriptional regulator PadR-like family.
       0.494
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.