STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1849Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: sco:SCO0137 sugar-transport protein; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: Sugar-transporter; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2. (155 aa)    
Predicted Functional Partners:
Tmar_1848
COGs: COG3414 Phosphotransferase system galactitol-specific IIB component; InterPro IPR013011: IPR003501; KEGG: lmy:LM5923_2124 hypothetical protein; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; SPTR: Lmo1972 protein; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
 
 
 0.996
Tmar_1847
Putative sugar-specific permease SgaT/UlaA; COGs: COG3037 conserved hypothetical protein; InterPro IPR018062; KEGG: smf:Smon_1148 putative sugar-specific permease SgaT/UlaA; SPTR: Transport protein, SgaT family; PFAM: PTS system sugar-specific permease component.
 
 
 0.991
Tmar_0582
COGs: COG3414 Phosphotransferase system galactitol-specific IIB component; InterPro IPR013011: IPR003501; KEGG: lin:lin2799 hypothetical protein; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; SPTR: Phosphotransferase system lactose/cellobiose-specific IIB subunit; PFAM: PTS system, Lactose/Cellobiose specific IIB subunit.
 
 
 0.984
Tmar_0583
COGs: COG3037 conserved hypothetical protein; KEGG: cpo:COPRO5265_0028 PTS system ascorbate-specific transporter subunit IIC; SPTR: Putative sugar-specific permease, SgaT/UlaA superfamily; PFAM: PTS system sugar-specific permease component.
 
 
 0.981
Tmar_1558
Transcriptional antiterminator, BglG; COGs: COG3711 Transcriptional antiterminator; InterPro IPR013011: IPR011608: IPR005829; KEGG: hor:Hore_20170 transcriptional antiterminator, BglG; PFAM: PRD domain protein; PRIAM: Protein-N(pi)-phosphohistidine--sugar phosphotransferase; SPTR: Transcriptional antiterminator, BglG; PFAM: HTH domain; PTS system, Lactose/Cellobiose specific IIB subunit; PRD domain.
  
 0.977
Tmar_2035
COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698: IPR000032: IPR001020: IPR002114; KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins; PFAM: phosphoryl transfer system HPr; SPTR: Phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
  
 
 0.923
Tmar_0581
Putative PTS IIA-like nitrogen-regulatory protein PtsN; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: cpo:COPRO5265_0027 PtsN protein; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: PtsN protein; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
  
 
0.905
Tmar_1840
1-phosphofructokinase; COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR017583: IPR002173: IPR011611; KEGG: sro:Sros_1164 1-phosphofructokinase; PFAM: PfkB domain protein; SPTR: 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family.
 
  
 0.742
Tmar_0231
Hypothetical protein; Displays ATPase and GTPase activities.
  
  
 0.631
Tmar_1846
Hypothetical protein.
       0.519
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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