STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_1901Transposase; KEGG: btl:BALH_1957 transposase; SPTR: Transposase; PFAM: Transposase. (249 aa)    
Predicted Functional Partners:
Tmar_0343
Hypothetical protein; KEGG: bcz:pE33L466_0247 transposase; SPTR: Transposase; manually curated; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.761
Tmar_1894
Hypothetical protein; KEGG: bcz:pE33L466_0247 transposase; SPTR: Transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.749
Tmar_0392
Transposase IS116/IS110/IS902 family protein; InterPro IPR003346; KEGG: pth:PTH_2396 transposase and inactivated derivatives; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase and inactivated derivatives; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.711
Tmar_1530
Transposase IS116/IS110/IS902 family protein; InterPro IPR003346; KEGG: pth:PTH_2396 transposase and inactivated derivatives; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase and inactivated derivatives; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.711
Tmar_1540
Transposase IS116/IS110/IS902 family protein; InterPro IPR003346; KEGG: bmj:BMULJ_06183 ISBmu4 transposase; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: ISBmu4 transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.650
Tmar_1896
Transposase IS116/IS110/IS902 family protein; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: cti:pRALTA_0502 transposase, IS110 family; PFAM: transposase IS116/IS110/IS902 family protein; SPTR: Transposase; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
 
     0.423
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.