Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Tmar_2012Carbohydrate ABC transporter ATP-binding protein, CUT1 family; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593: IPR003439: IPR017871: IPR013611; KEGG: sth:STH1782 sugar ABC transportor ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Sugar ABC transportor ATP-binding protein; PFAM: ABC transporter; TOBE domain. (384 aa)    
Predicted Functional Partners:
Tmar_1531
Carbohydrate ABC transporter membrane protein 1, CUT1 family; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ttr:Tter_0184 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.971
Tmar_1887
Carbohydrate ABC transporter membrane protein 1, CUT1 family; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bcl:ABC0339 glycerol-3-phosphate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Glycerol-3-phosphate ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.971
Tmar_1988
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rxy:Rxyl_2070 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.971
Tmar_1886
Carbohydrate ABC transporter membrane protein 2, CUT1 family; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: mta:Moth_1482 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.935
Tmar_1987
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: rle:pRL90268 putative permease component of ABC transporter; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.929
Tmar_1532
Carbohydrate ABC transporter membrane protein 2, CUT1 family; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sth:STH1313 sugar ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.928
Tmar_0724
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR000412: IPR013525: IPR013526; KEGG: tjr:TherJR_1941 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
   
 0.925
Tmar_1989
Extracellular solute-binding protein family 1; COGs: COG2182 Maltose-binding periplasmic protein/domains; InterPro IPR006059; KEGG: rxy:Rxyl_2071 twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein family 1; SPTR: Twin-arginine translocation pathway signal; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.918
Tmar_1889
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: mta:Moth_1484 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein, family 1; PFAM: Bacterial extracellular solute-binding protein.
 
 0.903
Tmar_1529
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sth:STH1311 sugar ABC transporter sugar-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Sugar ABC transporter sugar-binding protein; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.873
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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