STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmar_2012Carbohydrate ABC transporter ATP-binding protein, CUT1 family; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593: IPR003439: IPR017871: IPR013611; KEGG: sth:STH1782 sugar ABC transportor ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Sugar ABC transportor ATP-binding protein; PFAM: ABC transporter; TOBE domain. (384 aa)    
Predicted Functional Partners:
Tmar_1531
Carbohydrate ABC transporter membrane protein 1, CUT1 family; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ttr:Tter_0184 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.953
Tmar_1887
Carbohydrate ABC transporter membrane protein 1, CUT1 family; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bcl:ABC0339 glycerol-3-phosphate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Glycerol-3-phosphate ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.953
Tmar_1988
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rxy:Rxyl_2070 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.946
Tmar_1886
Carbohydrate ABC transporter membrane protein 2, CUT1 family; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: mta:Moth_1482 binding-protein dependent transport system inner membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.942
Tmar_1989
Extracellular solute-binding protein family 1; COGs: COG2182 Maltose-binding periplasmic protein/domains; InterPro IPR006059; KEGG: rxy:Rxyl_2071 twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein family 1; SPTR: Twin-arginine translocation pathway signal; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.939
Tmar_1532
Carbohydrate ABC transporter membrane protein 2, CUT1 family; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sth:STH1313 sugar ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.936
Tmar_1987
Binding-protein-dependent transport systems inner membrane component; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: rle:pRL90268 putative permease component of ABC transporter; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.931
Tmar_0724
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR000412: IPR013525: IPR013526; KEGG: tjr:TherJR_1941 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
   
 0.926
Tmar_1885
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593: IPR003439: IPR017871: IPR013611; KEGG: tro:trd_1135 sugar ABC transportor, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Sugar ABC transportor, ATP-binding protein; PFAM: ABC transporter; TOBE domain.
  
  
 
0.906
Tmar_1995
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR001991: IPR003838; KEGG: bay:RBAM_014110 YknZ; PFAM: protein of unknown function DUF214; SPTR: Putative permease; PFAM: Predicted permease.
 
      0.845
Your Current Organism:
Thermaerobacter marianensis
NCBI taxonomy Id: 644966
Other names: T. marianensis DSM 12885, Thermaerobacter marianensis 7p75a, Thermaerobacter marianensis ATCC 700841, Thermaerobacter marianensis DSM 12885, Thermaerobacter marianensis str. DSM 12885, Thermaerobacter marianensis strain DSM 12885
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