Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR16877.1 | glrK | ckrop_0080 | ckrop_0081 | Putative lysozyme precursor. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.623 |
glrK | ACR16877.1 | ckrop_0081 | ckrop_0080 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Putative lysozyme precursor. | 0.623 |
glrK | gntP | ckrop_0081 | ckrop_0167 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Gluconate transporter. | 0.563 |
glrK | gpmA | ckrop_0081 | ckrop_1925 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.902 |
glrK | tadA | ckrop_0081 | ckrop_0199 | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | Putative cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.596 |
gntP | glrK | ckrop_0167 | ckrop_0081 | Gluconate transporter. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.563 |
gpmA | glrK | ckrop_1925 | ckrop_0081 | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.902 |
tadA | glrK | ckrop_0199 | ckrop_0081 | Putative cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | Glycerate kinase; Belongs to the glycerate kinase type-1 family. | 0.596 |