Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR17776.1 | dtd | ckrop_1023 | ckrop_1066 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.430 |
ACR17813.1 | ACR17814.1 | ckrop_1062 | ckrop_1063 | Conserved hypothetical protein. | Hypothetical protein. | 0.842 |
ACR17813.1 | ACR17815.1 | ckrop_1062 | ckrop_1064 | Conserved hypothetical protein. | Putative membrane protein. | 0.675 |
ACR17813.1 | ACR17816.1 | ckrop_1062 | ckrop_1065 | Conserved hypothetical protein. | Putative transferase; Belongs to the methyltransferase superfamily. | 0.696 |
ACR17813.1 | dtd | ckrop_1062 | ckrop_1066 | Conserved hypothetical protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.547 |
ACR17813.1 | dtxR | ckrop_1062 | ckrop_1068 | Conserved hypothetical protein. | Transcriptional regulator, DtxR family. | 0.583 |
ACR17813.1 | sigB | ckrop_1062 | ckrop_1067 | Conserved hypothetical protein. | RNA polymerase sigma factor B; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.464 |
ACR17814.1 | ACR17813.1 | ckrop_1063 | ckrop_1062 | Hypothetical protein. | Conserved hypothetical protein. | 0.842 |
ACR17814.1 | ACR17815.1 | ckrop_1063 | ckrop_1064 | Hypothetical protein. | Putative membrane protein. | 0.736 |
ACR17814.1 | ACR17816.1 | ckrop_1063 | ckrop_1065 | Hypothetical protein. | Putative transferase; Belongs to the methyltransferase superfamily. | 0.609 |
ACR17814.1 | dtd | ckrop_1063 | ckrop_1066 | Hypothetical protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.547 |
ACR17814.1 | dtxR | ckrop_1063 | ckrop_1068 | Hypothetical protein. | Transcriptional regulator, DtxR family. | 0.438 |
ACR17814.1 | sigB | ckrop_1063 | ckrop_1067 | Hypothetical protein. | RNA polymerase sigma factor B; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.464 |
ACR17815.1 | ACR17813.1 | ckrop_1064 | ckrop_1062 | Putative membrane protein. | Conserved hypothetical protein. | 0.675 |
ACR17815.1 | ACR17814.1 | ckrop_1064 | ckrop_1063 | Putative membrane protein. | Hypothetical protein. | 0.736 |
ACR17815.1 | ACR17816.1 | ckrop_1064 | ckrop_1065 | Putative membrane protein. | Putative transferase; Belongs to the methyltransferase superfamily. | 0.737 |
ACR17815.1 | dtd | ckrop_1064 | ckrop_1066 | Putative membrane protein. | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. | 0.632 |
ACR17815.1 | dtxR | ckrop_1064 | ckrop_1068 | Putative membrane protein. | Transcriptional regulator, DtxR family. | 0.455 |
ACR17815.1 | sigB | ckrop_1064 | ckrop_1067 | Putative membrane protein. | RNA polymerase sigma factor B; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.499 |
ACR17816.1 | ACR17813.1 | ckrop_1065 | ckrop_1062 | Putative transferase; Belongs to the methyltransferase superfamily. | Conserved hypothetical protein. | 0.696 |
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