STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiXPutative thiamine biosynthesis protein. (199 aa)    
Predicted Functional Partners:
qcrA
Ubiquinol-cytochrome c reductase iron-sulfur protein.
    
 
 0.934
qcrB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
    
 
 0.930
ACR17120.1
Putative secreted protein.
    
   0.913
ACR17907.1
Hypothetical protein.
    
   0.913
ACR17469.1
Cytochrome c oxidase subunit II.
    
 
 0.786
ACR17470.1
Putative membrane protein; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
   0.732
ACR17472.1
Cytochrome c oxidase subunit III.
    
   0.732
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit.
    
   0.732
ACR18148.1
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
    
   0.732
ACR18660.1
Putative membrane protein.
    
   0.732
Your Current Organism:
Corynebacterium kroppenstedtii
NCBI taxonomy Id: 645127
Other names: C. kroppenstedtii DSM 44385, Corynebacterium kroppenstedtii CCUG 35717, Corynebacterium kroppenstedtii CIP 105744, Corynebacterium kroppenstedtii DSM 44385, Corynebacterium kroppenstedtii str. DSM 44385, Corynebacterium kroppenstedtii strain DSM 44385
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