STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR18623.1Putative membrane protein. (309 aa)    
Predicted Functional Partners:
ACR16948.1
Putative secreted protein.
  
     0.769
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.690
ACR18621.1
Putative cation-transporting P-type ATPase.
       0.670
ACR18625.1
uroporphyrin-III C-methyltransferase / uroporphyrinogen-III synthase.
       0.588
hemL
Glutamate-1-semialdehyde aminotransferase; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
       0.571
ACR18622.1
Putative membrane protein.
       0.538
ACR18619.1
Putative phosphoglycerate mutase.
       0.484
smc
Chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 
 0.431
ACR18618.1
Thiol-disulfide isomerase/thioredoxin.
       0.420
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
       0.417
Your Current Organism:
Corynebacterium kroppenstedtii
NCBI taxonomy Id: 645127
Other names: C. kroppenstedtii DSM 44385, Corynebacterium kroppenstedtii CCUG 35717, Corynebacterium kroppenstedtii CIP 105744, Corynebacterium kroppenstedtii DSM 44385, Corynebacterium kroppenstedtii str. DSM 44385, Corynebacterium kroppenstedtii strain DSM 44385
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