STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_01425Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (390 aa)    
Predicted Functional Partners:
GLRG_09615
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.560
GLRG_06680
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.559
GLRG_08003
Metallo-beta-lactamase superfamily protein.
   
  0.556
GLRG_10076
2Fe-2S iron-sulfur cluster binding domain-containing protein.
   
  0.556
GLRG_02784
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.533
GLRG_03718
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.519
GLRG_02006
CRAL/TRIO domain-containing protein.
    
  0.496
GLRG_04626
CRAL/TRIO domain-containing protein.
    
  0.496
GLRG_11149
CRAL/TRIO domain-containing protein.
    
  0.496
GLRG_01324
Diacylglycerol acyltransferase.
     
 0.494
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.