STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_01993Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
GLRG_10021
GTP cyclohydrolase I.
    
 0.825
GLRG_09369
Nucleoside diphosphate kinase.
   
  0.784
GLRG_07108
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.733
GLRG_00908
NUDIX domain-containing protein.
    
  0.720
GLRG_10258
Nudix domain-containing protein.
    
  0.720
GLRG_05210
Glucoamylase.
   
 0.706
GLRG_08310
Glucoamylase.
   
 0.706
GLRG_10863
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.700
GLRG_08497
Molybdenum cofactor biosynthesis protein A.
    
  0.694
GLRG_08498
MoaC family protein.
    
  0.694
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.