STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_03766Erf4 domain-containing protein. (247 aa)    
Predicted Functional Partners:
GLRG_04123
Pex19 protein family.
    
 0.756
GLRG_00717
Peroxin 13.
   
 
 0.630
GLRG_02798
Pex2/Pex12 amino terminal region.
     
 0.628
GLRG_02658
Peroxisomal membrane protein PEX16.
   
 
 0.607
GLRG_03347
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
    
 0.592
GLRG_11260
OHCU decarboxylase.
    
 0.592
GLRG_00117
Peroxin-3.
   
 
 0.588
GLRG_07224
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
     
 0.583
GLRG_08771
Pex14_N domain-containing protein.
     
 0.568
GLRG_00221
Peroxin 11C.
   
 0.561
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.