STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_04704TAM domain methyltransferase. (341 aa)    
Predicted Functional Partners:
GLRG_09196
Serine/threonine protein kinase.
    
 0.632
GLRG_03305
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.556
GLRG_08353
RhoGAP domain-containing protein.
    
  0.542
GLRG_03808
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.541
GLRG_07814
HAD-superfamily subfamily IIA hydrolase.
    
  0.541
GLRG_09184
HAD-superfamily subfamily IIA hydrolase.
    
  0.541
GLRG_00129
PH domain-containing protein.
   
 0.529
GLRG_10962
Ubiquitin family protein.
    
  0.526
GLRG_07262
Dual specificity phosphatase.
   
  0.523
GLRG_09356
UBA/TS-N domain-containing protein.
   
  0.513
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.