STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_05157Ubiquitin-like domain-containing protein. (204 aa)    
Predicted Functional Partners:
GLRG_10195
Uncharacterized protein.
   
 0.999
GLRG_00950
Ubiquitin-conjugating enzyme.
   
 0.997
GLRG_07572
ABC transporter.
    
 
 0.990
GLRG_06907
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.983
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.982
GLRG_09193
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.982
GLRG_03015
3'-5' exonuclease.
    
  0.981
GLRG_06901
Nonspecific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.981
GLRG_06929
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.981
GLRG_01356
Uncharacterized protein.
    
  0.980
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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