STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_05520Glycosyl hydrolase family 12; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (267 aa)    
Predicted Functional Partners:
GLRG_00016
Peptidase family C50.
   
 
 0.656
GLRG_01318
Uncharacterized protein.
   
 
 0.633
GLRG_00702
WD domain-containing protein.
   
 
 0.553
GLRG_01293
WD domain-containing protein.
   
 
 0.553
GLRG_08131
WD domain-containing protein.
   
 
 0.553
GLRG_00764
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
    0.495
GLRG_09222
Uncharacterized protein.
   
 
  0.488
GLRG_09225
HORMA domain-containing protein.
   
 
  0.488
GLRG_00831
Protein kinase domain-containing protein.
   
 
  0.475
GLRG_04491
Protein kinase domain-containing protein.
   
 
  0.475
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.