STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_06550Uncharacterized protein; Belongs to the complex I LYR family. (360 aa)    
Predicted Functional Partners:
GLRG_02553
SRF-type transcription factor.
    
 0.687
GLRG_03849
Ion transporter.
    
  0.599
GLRG_11039
Snf5/smarcb1/ini1.
    
 0.541
GLRG_08892
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.503
GLRG_09196
Serine/threonine protein kinase.
    
 0.478
GLRG_00736
GATA zinc finger.
    
 0.477
GLRG_02537
GATA zinc finger.
    
 0.477
GLRG_02050
GATA zinc finger.
    
 0.477
GLRG_02051
GATA zinc finger.
    
 0.477
GLRG_02755
GATA zinc finger.
    
 0.477
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.