STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_07556Glycosyl hydrolase family 16. (504 aa)    
Predicted Functional Partners:
GLRG_05007
FAT domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.556
GLRG_02875
Transcription initiation factor IID.
    
  0.531
GLRG_07183
Spindle pole body-associated protein sad1.
    
 0.524
GLRG_06473
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.510
GLRG_00316
Uracil phosphoribosyltransferase.
    
 0.504
GLRG_03311
Uracil phosphoribosyltransferase.
    
 0.504
GLRG_05778
Uridine kinase; Belongs to the uridine kinase family.
    
 0.504
GLRG_04090
Platelet-activating factor acetylhydrolase.
     
 0.490
GLRG_00632
Histone acetyltransferase subunit 3.
    
 0.462
GLRG_08353
RhoGAP domain-containing protein.
   
 0.452
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.