Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLRG_00761 | GLRG_02347 | E3Q3L5 | E3Q8G4 | Succinate-semialdehyde dehydrogenase. | Short chain dehydrogenase. | 0.651 |
GLRG_00761 | GLRG_08040 | E3Q3L5 | E3QPW9 | Succinate-semialdehyde dehydrogenase. | Succinate-semialdehyde dehydrogenase. | 0.472 |
GLRG_00761 | GLRG_08603 | E3Q3L5 | E3QS36 | Succinate-semialdehyde dehydrogenase. | Delta-aminolevulinic acid dehydratase. | 0.447 |
GLRG_00761 | GLRG_08604 | E3Q3L5 | E3QS37 | Succinate-semialdehyde dehydrogenase. | Alcohol dehydrogenase GroES-like domain-containing protein. | 0.447 |
GLRG_00761 | GLRG_11778 | E3Q3L5 | E3R0J5 | Succinate-semialdehyde dehydrogenase. | Beta-ketoacyl synthase domain-containing protein. | 0.439 |
GLRG_02347 | GLRG_00761 | E3Q8G4 | E3Q3L5 | Short chain dehydrogenase. | Succinate-semialdehyde dehydrogenase. | 0.651 |
GLRG_02347 | GLRG_02724 | E3Q8G4 | E3Q9P2 | Short chain dehydrogenase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.680 |
GLRG_02347 | GLRG_05923 | E3Q8G4 | E3QIU1 | Short chain dehydrogenase. | Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.651 |
GLRG_02347 | GLRG_06346 | E3Q8G4 | E3QK14 | Short chain dehydrogenase. | Succinate-semialdehyde dehydrogenase. | 0.651 |
GLRG_02347 | GLRG_07740 | E3Q8G4 | E3QNI3 | Short chain dehydrogenase. | Succinate-semialdehyde dehydrogenase. | 0.651 |
GLRG_02347 | GLRG_08040 | E3Q8G4 | E3QPW9 | Short chain dehydrogenase. | Succinate-semialdehyde dehydrogenase. | 0.651 |
GLRG_02347 | GLRG_08603 | E3Q8G4 | E3QS36 | Short chain dehydrogenase. | Delta-aminolevulinic acid dehydratase. | 0.523 |
GLRG_02347 | GLRG_08604 | E3Q8G4 | E3QS37 | Short chain dehydrogenase. | Alcohol dehydrogenase GroES-like domain-containing protein. | 0.523 |
GLRG_02347 | GLRG_09473 | E3Q8G4 | E3QTZ1 | Short chain dehydrogenase. | Cytochrome b5-like Heme/Steroid binding domain-containing protein. | 0.680 |
GLRG_02347 | GLRG_11778 | E3Q8G4 | E3R0J5 | Short chain dehydrogenase. | Beta-ketoacyl synthase domain-containing protein. | 0.800 |
GLRG_02724 | GLRG_02347 | E3Q9P2 | E3Q8G4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Short chain dehydrogenase. | 0.680 |
GLRG_02724 | GLRG_08603 | E3Q9P2 | E3QS36 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Delta-aminolevulinic acid dehydratase. | 0.507 |
GLRG_02724 | GLRG_08604 | E3Q9P2 | E3QS37 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Alcohol dehydrogenase GroES-like domain-containing protein. | 0.507 |
GLRG_02724 | GLRG_09473 | E3Q9P2 | E3QTZ1 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome b5-like Heme/Steroid binding domain-containing protein. | 0.970 |
GLRG_05923 | GLRG_02347 | E3QIU1 | E3Q8G4 | Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Short chain dehydrogenase. | 0.651 |
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