STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLRG_10072Uncharacterized protein. (568 aa)    
Predicted Functional Partners:
GLRG_04962
WD domain-containing protein.
    
 
 0.845
GLRG_03476
SNF2 family domain-containing protein.
    
 
 0.794
GLRG_07157
SNF2 family domain-containing protein.
    
 
 0.794
GLRG_06182
Sister chromatid cohesion protein.
   
    0.735
GLRG_03725
SET domain-containing protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
   0.684
GLRG_06531
SPOC domain-containing protein.
   
    0.656
GLRG_03762
SNF2 family domain-containing protein.
   
   0.618
GLRG_00473
Uncharacterized protein.
   
 
  0.553
GLRG_01442
Inorganic pyrophosphatase.
    
 
 0.469
GLRG_09364
Inorganic pyrophosphatase.
    
 
 0.469
Your Current Organism:
Colletotrichum graminicola
NCBI taxonomy Id: 645133
Other names: C. graminicola M1.001, Colletotrichum graminicola M1.001, Glomerella graminicola M1.001
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